Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015830873.1_cds_XP_016504315.1_17769
CDS Infomation

[gene=LOC107822295] [db_xref=GeneID:107822295] [protein=calnexin homolog 1-like] [protein_id=XP_016504315.1] [location=join(25000..25092,25227..25296,27213..28336,28433..28504,28583..28702,28834..28974)] [gbkey=CDS]
Sequence

ATGGAGGAGCGGAGCCGGAGGATGTGGACGCGATATGCGCTGTTGCTATTGGCCGGTTGC
TTCGTCTCTCAACTCTACGCCTCTTCAGATGTGAAATTTTACGAGTCGTTCGATGAGGCA
TTTGATGGGCGTTGGATTGTGTCTGAGAAAGAGGAGTATAATGGTGTGTGGAAACATGCC
AAGAGTGAAGGGCATGATGACCATGGGCTTCTTGTGAGTGAGAAGGCAAGGAAATATGCT
ATTGTCAAGGAGCTTGATGATGTTGTCGACCTCAAAGATGGAACTGTGGTTCTTCAATAT
GAAGTTCGCCTCCAGGATGGACTTGAATGTGGTGGTGCTTATCTTAAATACCTCCGGCCC
CAGGAGGCAGGTTGGATTCCTAAGGAATTCAACAATGAGTCTCCCTATACTATAATGTTT
GGACCAGATAGATGTGGAGCCACAAACAAGGTTCACTTCATCTTGAAACACAAGAATCCT
AAGAGTGGGGAGTACATCGAGCACCACCTTAATTTTCCACCATCTGTACCTTCTGACAAA
CTAACCCATGTCTACACTGCTGTGCTGAAACCGGACAATGAGTTGCTGATCTTGATTGAC
GGGGAAGAGAAGAAGAAGGCTAGCTTTCTTTCAGAGGATGATTTTGAGCCATCTCTCATT
CCTGCACAGACGATTCCAGATCCAGAAGATAAGAAGCCCGAGGACTGGGATGAGAGGGAA
AAGATCCCAGACCCAGATGCTAAGAAACCTGATGATTGGGACGAGGATGCACCAATGGAG
ATTGAAGATGAGGAAGCTGAGAAGCCCGAGGGATGGTTGGATGACGAGCCTGAAGAGATC
GATGATCCTGAGGCAACAAAGCCTGAAGATTGGGTTGATGAGGAAGATGGTGAATGGGAG
GCTCCAAAAATTGATAACCCGAAGTGTGCCGAGGGCCCTGGATGTGGGGAGTGGAGAAGA
CCAATGAAGAGGAATCCAGCTTACAAGGGAAAATGGCATGCTCCATTGATTGACAATCCC
AATTACAAGGGTATTTGGAAGCCAAGGGATATTCCAAATCCTAACTATTTCGAACTGGAC
AGGCCAAATTTTGAGCCTATTGCAGCAATTGGCATTGAAATTTGGACAATGCAAGATGGT
ATATTGTTTGACAATATCTTGATAGCCAGTGATGAGAAAGTTGCAGAATCATACAGGAAG
ACTGCTTGGAAGCCCAAATTTGATGTAGAGAAAGAGAAACAGAAGGCTGAGGAAGCAACG
ACCTCTGGTGGTCTCAAAGGATTCCAGAAAATGGTATTTGATCTCCTCTACAAGGTGGCT
GACATCCCATTGTTGGGTGAACACAAGTCCAAAGTACTGGATCTTCTTGAGAAGGCCGAG
ACACAGCCTAATCTCACAGTTGGTGTTGTCATTTCAATCATAGTTATCATCTTCACAGTT
CTCTTGAAACTCACCTTTGGTGGAAAGAAGCAGCAACCTGCAAGAGCTACTGAAGAGCCT
AAGAGAAGTGATGGTGCCGAGGCATCCACTTCTAACAGCCAAGGAGCTACAGAGGAGAAA
GATGAGCAGAATGAGGATGCTACTGCTGCTCCTCGTAGAAGGACGAGACGTGATAATTAG

Peptide Sequence

PEP ID

XP_016504315.1
PEP Infomation

PREDICTED: calnexin homolog 1-like [Nicotiana tabacum]
Sequence

MEERSRRMWTRYALLLLAGCFVSQLYASSDVKFYESFDEAFDGRWIVSEKEEYNGVWKHA
KSEGHDDHGLLVSEKARKYAIVKELDDVVDLKDGTVVLQYEVRLQDGLECGGAYLKYLRP
QEAGWIPKEFNNESPYTIMFGPDRCGATNKVHFILKHKNPKSGEYIEHHLNFPPSVPSDK
LTHVYTAVLKPDNELLILIDGEEKKKASFLSEDDFEPSLIPAQTIPDPEDKKPEDWDERE
KIPDPDAKKPDDWDEDAPMEIEDEEAEKPEGWLDDEPEEIDDPEATKPEDWVDEEDGEWE
APKIDNPKCAEGPGCGEWRRPMKRNPAYKGKWHAPLIDNPNYKGIWKPRDIPNPNYFELD
RPNFEPIAAIGIEIWTMQDGILFDNILIASDEKVAESYRKTAWKPKFDVEKEKQKAEEAT
TSGGLKGFQKMVFDLLYKVADIPLLGEHKSKVLDLLEKAETQPNLTVGVVISIIVIIFTV
LLKLTFGGKKQQPARATEEPKRSDGAEASTSNSQGATEEKDEQNEDATAAPRRRTRRDN

Transcript Sequence

Gene sequence data has not been registered.